Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKRIDYLSNKQNKYSIRRFTVGTTSVIVGATILFGIGNHQAQASEQSNDTTQSSKNNASADSEKNNMIETPQLNTTANDTSDISANTNSANVDSTTKPMSTQTSNTTTTEPASTNETPQPTAIKNQATAAKMQDQTVPQEANSQVDNKTTNDANSIATNSELKNSQTLDLPQSSPQTISNAQGTSKPSVRTRAVRSLAVAEPVVNAADAKGTNVNDKVTASNFKLE------KTTFDPNQSGNTFMAANFTVTDKVKSGDYFTAKLPDSLTGNGDVDYSNSNNTMPIADIKSTNGDVVAKATYDILTKTYTFVFTDYVNNKENINGQFSLPLFTDRAKAPKS-GTYDANINIADEMFNNKITYNYSSPIAGIDKPNGANISSQIIGVDTASGQNTYKQTVFVNPKQRVLGNTWVYIKGYQDKIEESSGKVSATDTKLRIFEVNDTSKLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIKFGDI-TKTYVVLVEGHYDNTGKNLKTQVIQENVDPVTNRDYSIFGWNNENVVRYGGGSADGDSAVNPKDPTPGPPVDPEPSPDPEPEPTPDPEPSPDPEPEPSPDPDPDSDSDSDSGSDSDSGSDSDSESDSDSDSDSDSDSDSDSESDSDSESDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSESDSDSESDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSRVTPPNNEQKAPSNPKGEVNHSNKVSKQHKTDALPETGDKSENTNATLFGAMMALLGSLLLFRKRKQDHKEKA |
3IRP Chain:X ((2-419)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQSGRNVNHLVFANTSYEILGGGKKYNQVFMTMDGKLKIKIDYTVDDSVVEGDYFTVDFGKY------IHPGTSRKPYRVNNIHDANGRTIAIGSYDSATNTAKYTFTNYVDIYNNVRGSFSLLSWPFKELVTTDKQSVPVGITVAGEDYTQNVIFNYGNR------------TVPVISDINYLTKDFAEFTTYINQNRAFNTGSKVRLSGQGFKFT--------SPDEIEVYKVLNNSQFRDSFSPD-----YANLTQVRNPKIIINSDGSATVDLGDIGTLGYIIRSKPNTLPDFSGIGVLKSEYTFTNNKNQRDTRAHASSIQFVRAELAGFGGFGGYVWFDKNNDGVQNDSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMPEGYIPTQANSTVDDKDSDVVFENGRYIAHVTIKDADNMTIDAGLVSD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IRP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 130536 for 3306 contacts (39.5/contact) +
2D Compatibility (PS) -44079 + (NN) -29217 + (LL) 5808
1D Compatibility (HY) -11200 + (ID) 3450
Total energy: 48398.0 ( 14.64 by residue)
QMean score : 0.193
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