Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAFLGALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHDETTKAKTPYIANWIQFLEPIKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQERVINN-ELKIFGWHYIIETGRIYNYNFESHFFEPIEETIKQRISHENF
3E3I Chain:A ((5-209))
KQLFANNYSWAQRMKEE------------TPHYLWIACSDSRVPAEKLTNLEPGELFVHRNVANQVIHT-----DFNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAMADK------DLGLINNWLLHIRDIWFKHGHLL-GKLSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVNDGFLVDQGVMATSRETLEISYRNAIARLSI
General information:
TITO was launched using:
RESULT:
Template:
3E3I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133716 for 1450 contacts (-92.2/contact) +
2D Compatibility (PS) -20606 + (NN) -8717 + (LL) 1864
1D Compatibility (HY) -10400 + (ID) 2450
Total energy: -174025.0 ( -120.02 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_3E3I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E3I-query.scw
PDB file :
Tito_Scwrl_3E3I.pdb
: