Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQEFLGFGVVGNFAGHLEQAGESHSFINMKSEEKDAPKGLFPFYIPYE-NCYLGRCCI---------------NNHKIILPSDPDLRVQAEPEIALECDVKYDEKHLVTKLVP-------NFFMAFNDASVRN-LEATK-----LSQKKNFSPASKGIGQKLPIDRFVYGG--VCNNFSIASFLKYDNVWHIYGENSKLLKYEFFYQKLLDWIKNQLNHQQDGDSLEALRPFLERHNFPTKMIFAIGATPYMPFAQEHFLQKGDEVVIVAYNHLQYSFEKIQNLLEEDALQTKEHANLSYVYQIVE
1NKQ Chain:A ((12-238))-----IICIGRNYAAHIKELNN----------------Q--PFFFLKPTSSIVTPLSSSPANSTFNGLNEDGTNPGPIFIPR-G-VKVHHEIELALIVSKHLS---NVTKMKPEEVYDSISGVALALDLTARNVQDEAKKKGLPWTISKGFD-TFMPISAIVSREKFSSYKSNLQDIFRVK--CSVNGQLRQDGGTN---LMLHP----LHKILQHIS---------------TMISLEPGDIILTGTPA-----GVGELKPGDRVHCELLQNNDNIVDMNFECENRPGPYEFRE-----------


General information:
TITO was launched using:
RESULT:

Template: 1NKQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67854 for 1379 contacts (-49.2/contact) +
2D Compatibility (PS) -19758 + (NN) 935 + (LL) 4992
1D Compatibility (HY) -6000 + (ID) 1750
Total energy: -89435.0 ( -64.85 by residue)
QMean score : 0.269

(partial model without unconserved sides chains):
PDB file : Tito_1NKQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NKQ-query.scw
PDB file : Tito_Scwrl_1NKQ.pdb: