Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKLLSAIKQKVSNYFLGVLPKSYSMSEENNILGLYDEHFLLTKNENLVGILRLEGV-SYTHLSTEQLQDLFTERQMALDSLEKVVARLVVKRRKIDYKQSIQSDSQYL--------QAILNQFENKEVYENQYFLVLESTHSL------HGVLEHKKKSFMHANRENFKDILSYKAHFLQETLKSLEIQLKNYAPKLLNSKEVLNFYAEYINGFELPLKPLVGGYLSDSYIASSITFEKDYFIQESFNQKTYNRLIGIKAYESERITSIAVGALLYQETPLDIIFSIEPMSVNKTLSFLKERAKFSMSNLVKNELLEYQELVKTKRLSMQKFALNVLIKAPSLEDLDAQTSLILGLLFKENLVGVIETFGLKGGYFSFFPERIHLNHRLRFLTSKALACLMVFERQNLGFKANSWGNSPLSVFKNLDYSPFLFNFHNQEVSHNNAKEIARVNGHTLVIGATGSGKSTLISYLMMSALKYQNMRLLAFDRMQGLYSFTEFFKGHYHDGQSFSINPFCLEPNLQNLEFLQSFFLSMLDLAPSRDKEALEDMNAISGAIKSLYETLYPKDFSLLDFKETLKRTSSNQLGLSLEPYLNNPLFNALNDAFNSNAFLNVINLDAITQNPKDLGLLAYYLFYKILEESRKNDSGFLVFLDEFKSYVENDLLNTKINALITQARKANGVVVLALQDIYQLS-GVKNAHSFLSNMGTLILYPQKNARELKHNFNVPLSETEISFLENTPLYARQVLVKNLGNGSSNMIDVSLEGLGCYLKIFNSDSSHVNKVKALQKDYPTEWREKLLKS |
| 2BVL Chain:A ((1-543)) | MSLVNRKQLEKMANVRF------RTQEDEYVAILDALEEYHNMSENTVVEKYLKLKDINSLTDICIDTYKK--SGRNKALKKFKEYLVTEVLELKNNNLTP-VEKNLHFVWIGGQINDTAINYINQWKDVNSDYNVNVFYDSNAFLINTLKKTVVESAINDTLESFRENLNDPRFDYNKFFRKRMEIIYDKQKNFINYYKAQREE---------NPELIIDDIVKTYLSNEY--SKEIDELNTYIEESLNKITQNSGNDVRNF----------GEFKNGES----------------------------FNLYEQELVE--------RWNL--AAASDILRISALKEI--------------------------GG---------------MYLDVDMLP-----------------GIQP-DLFESIEKPS------------------------------------------------SVTVDFWEMTKLEAIMKYKEYIPEY------------------------TSEHFDMLD---EEVQSSFESVLASKSDKSEIFSSLGDMEASPLEV--KIAFNSKGIINQGLISVKDSYCSNLIVKQIENRYKILNNSLNPAISEDNDFNTTTNTFIDSIMAEANADNGRFMMELGKYLR------VGFFPDVKTTINLSGPEAYAAAYQDLLMFKEGSMNIH-----------LIEADLRNFE------ISKTNIS--QSTEQEMASLW-----------------------------SFDDARAKAQFEEYKRNYFEGAL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51631 for 4179 contacts (-12.4/contact) +
2D Compatibility (PS) -54490 + (NN) -11681 + (LL) 18252
1D Compatibility (HY) -20000 + (ID) 5000
Total energy: -124550.0 ( -29.80 by residue)
QMean score : 0.275
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