Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYSAIPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLAT-SIIFNSFHQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVK---EHGLEGVSGLHFHTHCEQN-ADALCRTLEHVERHFKPY---LENMAWVNFGGGHHITRSD----YDVNLLIQTIKDFKERYHNTEVILEPGEAIGWQCGFLIASVIDIVQ-NDQEIAILDASFSAHMPDCLEMPYRPSILKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGS-FSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKIDSQGFKILKS-FSYEDYKNRN |
| 2P3E Chain:A ((29-415)) | ---AQTFGTPLYVYSSNFIKERFEAYRKAFP--DALICYAVKANFNPHLVKLLGELGAGADIVSGGELYLAKKA--GI-PPERIVYAGVGKTEKELTDAVDSEILMFNVESRQELDVLNEIAGK--------LGKKARIAIRVNP----------------SKFGVDIREAQKEYEYASKLENLEIVGIHCHIGSQILDISPYREAVEKVVSLYESLTQKGFDIKYLDIGGGLGIKYKPEDKEPAPQDLADLLKDLL--V-KAKIILEPGRSIMGNAGILITQVQFLKDKGSKHFIIVDAGMNDLIRPSIYNAYHHII-PVET------------KE---VVADIVGPICETGDFLALDREIE-EVQRGEYLAVLSAGAYGFAMSSHYNMRPRAAEVLVENGSVKLIRKRENYDYIVEPS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201748 for 2965 contacts (-68.0/contact) +
2D Compatibility (PS) -37457 + (NN) -9196 + (LL) 3428
1D Compatibility (HY) -12400 + (ID) 3250
Total energy: -260623.0 ( -87.90 by residue)
QMean score : 0.431
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