Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MTSLFHLKFLKPLSCLQAGLLYSLIFGVLYHFPLFAYVYKESNQVSFIAMIIIVLFCVNGALFLALGLISAYLMRWSAIVFSWLNSVAFYFISAYKVFLNKSMMGNVLNTNTHEVLGFLSVKLFVFIVVFGVLPGYVIYKIPLKNSSKKAPFLAILALVFIFIASAFMNAKNWLWFDKHAKFIGGLILPFAYSVNAFRVSALKFFAPTIKPLPLFSPNHSHSFVVLVIGESARKSNYALYGYEKPTTPRLSKRLENHELTLFNATSCATYTTASLECILDSSFKNSLGAYENLPTYLTKAGVKVFWYSANDGEKNVKVTSYLKNYELIQKCPNCEAIAPYDESLLYNLPNLLKERSNENILLILHLAGSHGPNYDNKVPLNFRVF-KPYCSSADLSSCSKESLINAYDNTIFYNDYLLDKIISMLENAKQPALMIYLSDHGESLGEGAYYLHGIPKSIAPKEQYEIPFILYANDLFKEKHS-IIQTQTPINQNTIFHSVLGVFEDFKTPSAVYRPSLDLLKHKKE |
| 4IKW Chain:A ((3-494)) | SIDKQQIAASVPQRGFFGHPKGLFTLFFTEFWERFSYY--GMRAILVYYMYYE--------VSKGGLGLDEHLALAIMSIYGALVYMSGIIGGWLADRVFGTSRAVFYGGLLIMAGHIALAIPGGVAALFVSMALIVLGTGLLKPNVSSIVGDM------YKPGDDRRDAGFSIFYMGINLGAFLAPLVVGTAGMKY---------NFHLGFGLAAVGMFLGLVVFVATRKKNLGLAGTYVPNPLTPAEKKKAAAIMAVGAVVIAVLLAILIPNGWFTVETFISLVGILGIIIPIIYFVVMYRSPKTTAEERSRVIAYIPLFVASAMFWAIQEQGSTILANYADKRTQLDV------AGIHLSPAWFQSLNPLFIIILAPVFAWMWVKLGKRQPTIPQKFALGLLFAGLSFIVILVPGHLSGGGLVHPIWLVLSYFIVVLGELC--LSPVGLSATTKL--------------------APAAFSAQTMSLWFLSNAAAQAINAQLVRFYTPENETAYFGTIGGAALVLGLILLAIAPRIGRLMKG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246380 for 3982 contacts (-61.9/contact) +
2D Compatibility (PS) -47245 + (NN) -9535 + (LL) 2840
1D Compatibility (HY) -22400 + (ID) 2950
Total energy: -325670.0 ( -81.79 by residue)
QMean score : 0.115
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