Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MKEKPFNSEQ-MAFLEELLSHQEKHLESKLSGFSVNDLDMQSVFRLERNRL---KIAYRLLGLMSFIALVLAI------VLISILPLQKTEHHFVDFLNQDKHYAIIQRA--DKSISSNEALARSLIGAYVLN----RESINRIDDKSRYELVRLQSSSKVWQRFEDLIKAQNSIYVQSHLEREVHIVNIAIY-QQDNNPIASVSIAAKLLNENKLVYEKRYKIVLSYLFDT-PDFDYASMPKNPTGFKITRYSITEIAPTNRND-------- |
| 4F3V Chain:A ((1-275)) | GHMTDRLASLFESAVSMLPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLA-----LFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGN----ESAAVALLEWLQTTHPEPKVAAALKDPS-YRLKTTTAEQIA--SRADPWDPGSVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53386 for 1811 contacts (-29.5/contact) +
2D Compatibility (PS) -25205 + (NN) -9003 + (LL) 572
1D Compatibility (HY) -2400 + (ID) 2050
Total energy: -91472.0 ( -50.51 by residue)
QMean score : 0.246
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