Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSVTLACGNGGKETNALIERVFMPYLKEWIVAFDEDA-PKFEA----SGEYCVSTDSFVITPLIF----NGGDIGKLCVCGSANDVSVQGGEPLYLNMGFILEEGLEIPLLKQILQSIQKELFKANLKLLSLDTKVVPKGSVD-KLFINTTCIGKIIK-P-GISSRHLQQGQAIILSDTIANHGASLFATRHEIK-L----K---T-------NLQSDCQLLYPLL---KPLFLSDLKIDALRDATRGGLASVLNEWANS-SRVKIVIEEEKIPLKEETKGICEILGLEPYAL---ANEG-VFVLALNQKDAPKALEILKSNEKAKNACVIGGVFENPYPSVVLKNAWGFERILEMPEGELLPRIC |
| 2V9Y Chain:A ((15-319)) | -------------------------------------GLFDLKAAGFKDPLLASGTDGVGTKLKIAQLCNKHDTIGQDLVAMCVNDILAQGAEPLFFLDYFSCGK-LDLSVTEAVVAGIAKACGKAGCALLGGETAEMPDMYPPGEYDLAGFAVGAMERDQKLPHLERITEGDVVVGIASSGLHSNGFSLVRKIVAKSSLQYSSPAPDGCGDQTLGDLLLTPTRIYSHSLLPVLR-SGHVKAFAHITGGGLLENIPRVLPEKLGVDLDAQTWRIPRV--FSWLQQEGHLSEEEMARTFNCGVGAVLVVSKEQTEQILRGIQQH--KEEAWVIGSVVAR--PRVKVKNLIESMQINGSVL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133638 for 2208 contacts (-60.5/contact) +
2D Compatibility (PS) -27937 + (NN) -5559 + (LL) 3320
1D Compatibility (HY) -6800 + (ID) 2550
Total energy: -173164.0 ( -78.43 by residue)
QMean score : 0.426
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