Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIERLVGNLRDLNPLDFNVDHVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSMPHSEPNFKVSLASDFKVVVK
3TJ8 Chain:B ((1-152))
MIIERLVGNLRDLNPLDFSVDYVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSMPH------------------
General information:
TITO was launched using:
RESULT:
Template:
3TJ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61804 for 1075 contacts (-57.5/contact) +
2D Compatibility (PS) -15784 + (NN) -2787 + (LL) 1268
1D Compatibility (HY) -22000 + (ID) 7500
Total energy: -108607.0 ( -101.03 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_3TJ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TJ8-query.scw
PDB file :
Tito_Scwrl_3TJ8.pdb
: