Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MKKI----FLGMALAFSV--------SMAEKSGAFL--GGGFQYSNLENQNTTRTPSANNNTPINTSMFGNNQAAPAQETPSVINTNNYGQMYGVDAMAGYKWFFGKTKRFGFRTYGYYSYNHANLSFVGSKLGIMDGASQVNNFTYGVGFDAL------YNFYESKEGYNTAGLFVGFGLGGDSFIVQGESYLKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGFKLPLFTNQFYKERGVDGSVDVFYKRNFSIYFNYMINL |
| 4Q3K Chain:A ((20-260)) | QGMNISKITINQHVGVTLTCYVQDVSQEMSNMSKRPAMLIFPGGGYQFC-----------SDREAEPIALSYLAKGYNAFVLRYS--VKEHAVFPRPLIDAEDALSYLKDNAHALHINPDKIAVIGF---SAGGHLATTLATEGKVRPNAVVLGYPALIRHEKYWNFPTPKVDQQTPEMFVFHTFEDDLVPLSHPLYIVEELSKAN---------------IPVEFHLFK--SGVHGLSLGNKIV----SNGLDKMIEDDVQVWFDLSCR-WLDKVLDL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -35042 for 1881 contacts (-18.6/contact) +
2D Compatibility (PS) -22460 + (NN) 1769 + (LL) 1800
1D Compatibility (HY) -15200 + (ID) 2150
Total energy: -71283.0 ( -37.90 by residue)
QMean score : 0.208
|
|
|