Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQYALLFPGQGSQCIGMGKSFYESHTLAKELFERASNVLKVDMKKTLFE-ENELLKESAYTQPAIYLVSYIAYQLLNKQANGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQR--TKNVWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKSKAVELLSLQLTQPVRYQDCVKS-NNDRVDVFFELGCGSVLKGLNKRLSNKPTISVGDNKGLDEAIEFLEEYV |
| 3SBM Chain:A ((1-279)) | -MKAYMFPGQGSQAKGMGRALFDAFPALTARADGV---LGYSIRALCQDDPDQRLSQTQFTQPALYVVNALSYLKRREE---EAPPDFLAGHSLGEFSALFAAGVFDFETGLALVKKRGELMGDA---RGGGMAAVIGLDEERVRELLDQNGATAVDIANLNSPSQVVISGAKDEIARLQVPFEAAGAKKYTVLRVSAAFHSRFMRPAMVEFGRFLEGYDFAPPKIPVISNVTARPCK-ADGIRAALSEQIASPVRWCESIRYLMGRGVEEFVECGHGIVLTGLYAQIRRDA--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166841 for 2416 contacts (-69.1/contact) +
2D Compatibility (PS) -29503 + (NN) -11182 + (LL) 1304
1D Compatibility (HY) -15200 + (ID) 4400
Total energy: -225822.0 ( -93.47 by residue)
QMean score : 0.603
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