Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASFSILSIFKIGVGPSSS-HTIGPMEAGAR-----------FCGLLKGILEQVERVQITLHGSLALTGKGHLS---------------------DEAVLIGLHGIYANELDITTKKALLHEAFE-------NKVLKLANQHHIPF-DYAKDLIFDNK--PLARHQNALILKAFNAKNEVLKEET-----YYSVGGGFVYTEKELDNLSEEGENESVAYDFS-----------------SAKELLELCQKHQKSIAEIVRLRENALKNHPDATMTKIYHAM------------------------LECYHNGANSKE-RYLPGSLKVTRLAPSVKTRLEKHPTSGKDPLALIDYISLYARSIAEENASGGKVVTAPTNGACAVVPSVLSYAKNHLFENLSQKSINDFLLTSAAIGYLYKKNASLSGAEAGCQAEIGVASSMAAGGLAHLCQATTQQVLIASEIAMEHHLGLTCDPVGGLVQIPCIERNVLGAIKAISASKLALEDEYKPKVSLDEVIATMYATGKDMNEKYKETSLGGLAKTLKC--------------------------------------- |
3W6W Chain:A ((4-620)) | GSPYLITGIPKDPKHPLPIRKDIDDWYLEQTSAGSNRIQLTLFVEALTVIQNRPLNDQLSYFRLAGIHGAPWTEWDGVPGGQKDSKGNPTGFCVHNNYTFPTWHRVYVTLYEQVIYEAMLDFIKQNVPQNGKADWENEAKQWRLPYWDFARFARGDELRLPILVTMPMVKVLVPGQPGKQLSKPNPLYRFQMQTLMGTLERPYAITSQKTEEHGWSFDLPFDKCQSTTKYGLLENYNADVWADGGQNWLRANLALNEHPWYQNLDGWDSVPTLQDMTFRLLTTGGLNWGEFSSTRYDDAPKNWMNLEAIHNNVHNWVGGFMFSRPGRHDLKLWGAGHMSSVPVAAYDPIFWLHHCNIDRLTAIWQTVNSGSWFN-DDKSKVSKDDDLRPFHRFCEKTRKVVFFRSDDVKDWRSLNYDYAITKDASRIRKEISDLYGQRTKEVYKDFGEEDYILSIRYSRYALGGKPFQINIFFGDVDGKDFYDARSQNFVGSVFNFSGSLEDSNCDKCAVLSVSQLPARLAVHYYKKQNKGEVPTPRYVVVNSQGKAEAEVKVEVALHKTEGTFYDYRRVADGKRAEVDDAYRA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3W6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -22625 for 3468 contacts (-6.5/contact) +
2D Compatibility (PS) -46093 + (NN) 3116 + (LL) 144
1D Compatibility (HY) 0 + (ID) 2500
Total energy: -67958.0 ( -19.60 by residue)
QMean score : 0.111
|
|
|