Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSFLEKNPFFFTLAFIFVFSIAGLVEILPNFFKSARPIEGLRPYTVLETAGRQIYIQEGCYHCHSQLIRPFQAEVDRYGAYSLSGEYAYDRPFLW-GSKRIGPDLHRVGDYRTTDWHEKHMLDPKSVVPHSIMPAYKHLFIKKSDFDTAYAEALTQKKVFGVPYDTENGVKLGNVEEAKKAYLEEAKKITADMKDKRVLEAIERGEVLEIVALIAYLNSLGNSRINANQNAK |
3M97 Chain:X ((40-139)) | --------------------------------------------ASADPAAGEKVF--GKCKACHKLDGNDGV-------GPHLNGVV--GRTVAGVDGFNYSDPMKAHGGDWTPEALQEFLTNPKAVVKGTKMAFAGLPKIE--DRANLIAYLEGQQ--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M97.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14549 for 685 contacts (-21.2/contact) +
2D Compatibility (PS) -10225 + (NN) -2292 + (LL) 10264
1D Compatibility (HY) 2000 + (ID) 950
Total energy: -15752.0 ( -23.00 by residue)
QMean score : 0.142
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