Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGRMELKNIISE-TLNEIEKMAKTIDDGFNTAQKTPSFFKTPSHLQNTPNSKNANTPLEPKNAAKIETQEKITEEKEEAKEIITEEIVQENPTQALIPNERVFLKGLLERTLVLFKGMQALEEKEALKRLDLVARFLQYQLSVLEKRLESLERENTE
1D2Z Chain:B ((1-150))
LSSKYSRNTELRRVEDNDIYRLAKILDEN-SCWRKLMSIIPKGMDVQACSGAGCLNFPAEIKKGFKY-TAQDVFQIDEAANRLPPDQ----SKSQMMIDEWKT--SGKLNERPTVGVLLQLLVQAELFSAADFVALDFLNESTPARPVDGPGALISLE
General information:
TITO was launched using:
RESULT:
Template:
1D2Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 36764 for 1085 contacts (33.9/contact) +
2D Compatibility (PS) -15655 + (NN) -4682 + (LL) 1164
1D Compatibility (HY) -1600 + (ID) 1350
Total energy: 14641.0 ( 13.49 by residue)
QMean score : 0.234
(partial model without unconserved sides chains):
PDB file :
Tito_1D2Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D2Z-query.scw
PDB file :
Tito_Scwrl_1D2Z.pdb
: