Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MADILSQEEIDALL---EVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKM-ARNLSSQVS--SIMRSIVEIQLHSV--------DQMTYGEFLMSLPSP---TSFNVFSMKPMGGTGVLEINPSIAFPMIDR-----LLGGKGSAYDQNREFSDIELNLLDTILRQVMQIL--KEVWSPVVEMYPTIDAKESSANVVQIVAQNEISIMVVLEIIIGH-------------------------SRGMMNICYPVISIESILSKMGSRDFMLSETNSKKSRNKELQALLSGVSVDMMVFLGAVE----------LSLKEMLDLDVGDTIRLNKVAN---DEVSVYVHKKKRYLASVGFQGYRKTIQIKEVVY-------------SEKERTKEILEMLEEQRRGKVGDIMKIEEE---------- |
| 4NLE Chain:A ((18-485)) | TIPNVLANRYASDEMVAIWSPEAKIIAERRLWLAVLRAQAELGVAVPDGVVEDYERVLENVDLESIAARERV-----RHDVKARIEEFNAHEHVHKGMTSRDLTENVEQLQIRQSLELVFSHGVAVVARLAERAVVYRDLVMAGRSHNVAAQATTLGKRFASAAEETLVALTRLRELIDRYPLRGVKGPMGTAQDMLDLFGG-DVGKLADLERRVAEFLGFTEVFTSVGQVYPR-SLDHDVLSALVQFGAGPSSMAHTIRLMAGHELVTEGFAPGQVGSSAMPHKMNTRSCERVNGLQVVLRGYASMAAELAGAQWNEGDVFCSVVRRVALPDAFFAIDGQTETFLTVLDEFGAYPAVIQRELDRYLPFLATTRILMAAVRAGVGREAAHEVIKEHAVAVALAMREQGREPDLIDRLAGDPRLPLDKVALEAALEDKQAFTGAAGDQVDGVVAAVGELVSRYPEAAKYTSG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NLE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19697 for 2462 contacts (-8.0/contact) +
2D Compatibility (PS) -35676 + (NN) -4159 + (LL) 784
1D Compatibility (HY) -8000 + (ID) 2900
Total energy: -69648.0 ( -28.29 by residue)
QMean score : 0.153
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