Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLVSLIVALVFCCFLGAVELPGVYQTQEFLYMKSSFVEFFEHNGKFYAYGISDVDGSKAKKDKLNPNPKLRNRSDKGVVFLSDLIKVGEQSYKGGKAYNFYDGKTYHVRVTQNSNGDLEFTSSYDKWGYVGKTFTWKRLSDEEIKNLKL----KRFNLDEVLKTLKDSPI |
5ABV Chain:B ((9-68)) | --------------------------------------------------------------------------------------------------------------VSYDIEHLLYYSMSPHSWTLPTDWQKMQETAPSILRNKDLQDESQRFDGDKYLASIKTAA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5ABV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4418 for 263 contacts (16.8/contact) +
2D Compatibility (PS) -5825 + (NN) -1068 + (LL) 6844
1D Compatibility (HY) -2400 + (ID) 550
Total energy: 1419.0 ( 5.40 by residue)
QMean score : 0.245
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