Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFEKWIGLTLLLSSLGYPCQKVSISFKQYENLIHIHQKGCN--NEVVCRTLISIALLESSLGLNNKREKSLKDTSYSMFHITLNTAKKFY------PTYSKTLLKTKLLNDVGFAI-QLAKQILKENFDYYHQKHPNKSVYQLVEMAIGAYNGGMKHNPNGAYMKKFRCIYSQVRYNE |
1LMQ Chain:A ((14-99)) | ------------------------------------ASGMDGYAGNSLPNWVCLSKWESSYNTQATNRNTDGSTDYGIFQINSRYWCDDGRTPGAKNVC--GIRCSQLLTDDLTVAIRCAKRVVLDPNGIGAWVAWRLHCQNQDLRSYVAGCGV------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18189 for 516 contacts (-35.2/contact) +
2D Compatibility (PS) -7772 + (NN) 1788 + (LL) 4920
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -22303.0 ( -43.22 by residue)
QMean score : 0.317
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