Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MELGFNEAERQKILDSNSSLIRNANEVRDKFIQNYAISLKDSNDPQDFLRRVQELRINMQKNFISFDTYYNYLNNLV--LASYNRCKQEKTFAESTIKNEL----TLGEFVAEISDNFNNFMCDEVARISDLVASYLPREYLPPFIDGNMMGVAFQIL-----GIDDFGRKLNEIVQDIGTKYIILSKNKTYLTSLERAKLITQLKLNLE------------------------------------------------------------------------------------------ |
| 4XGC Chain:C ((1-676)) | MQPFYEEYRKAWNQINDHIADLQHRSYARTLEQLVDFVVGQAERDEVLPTAALLTGINQPDHLSQFTALTQRLHAQRAAMVCVLQSRDCATLKAAVETLVFGLVEDNAEVEQLRRSQCTMKQLKSWYTNNFDSEQKRRQLVVILPDFECFNASVLQDLILILSAHCGSLPFVLVLGVATAMTAVHGTLPYHVSSKIRLRVFQTQAAPTGLNEVLDKVLLSPKYAFHLSGKTFKFLTHIFLYYDFSIHGFIQGFKYCLMEHFFGGNAFALCTDYSKALGRIKQLTHEDMETIRRLPSFRPYVEQINDCKRIIAVLT--------DDDYLKKKLPQLLRDCLLHFLLFRCSLEFLTELVGDLPRCPLGKLRRELYVNCLNRAIISTPEYKECLQMLSFLSKDEFVAKVNRALERTEQFLVEEIAPLELGEACTAVLRPKLEAIRLAVDEVGRALQKTLQLIETQIV-----QDHLRALQDAPPIHELFVFSDIATVRRNIIGAPRAALHTALNNPHFPDLSVVYKLHLECGRMINLFDWLQAFRSVVPQIQARFTRAVAELQFLGYIKMSKRKTDHATRLTW |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -68911 for 1257 contacts (-54.8/contact) +
2D Compatibility (PS) -19040 + (NN) -1440 + (LL) 712
1D Compatibility (HY) -10400 + (ID) 1750
Total energy: -100829.0 ( -80.21 by residue)
QMean score : 0.375
|
|
|