Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNRGVVLLDGQALAYNIEKDLKNKIQIITAQTHKRPKLAVILVGKDPASITYVNMKIKACQRVGMDFDLKTLKENITEAELLSLIKDYNTDQNISGILVQLPLPRSIDTKMILEAIDPNKDVDGFHPLNIGKLCTQK-ESFLPATPMGVMRLLEHYHIEIKGKDVAIIGASNIIGKPLSMLMLNAGASVSVCHILTKDISFYTKNADIVCVGVGKPDLIKASMLKKGAVVVDIGINHLNDGRIVGDVDFINAQKIAGFITPVPKGVGPMTIVSLLENTLIAFEKQQRKGF |
3L07 Chain:A ((3-284)) | ----AMILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVD-GKIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQELN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223532 for 2398 contacts (-93.2/contact) +
2D Compatibility (PS) -30074 + (NN) -9530 + (LL) 136
1D Compatibility (HY) -23600 + (ID) 6650
Total energy: -293250.0 ( -122.29 by residue)
QMean score : 0.596
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