Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDFKVPPKAKGFKRLFKALFYSKDGLKCAWAEESAFRQIVILALFCIVLASYLTKDFLEWGLLILPCFLSVVIELINSSIEKAVDFTGTEFHPLAKKAKDMASSAQLIGLIFWAFIWGRYLLTLYFN
3ZE3 Chain:D ((23-121))
-------------------AGYSWKGLRAAWINEAAFRQEGVAVLLCVVIAAWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSEYHELSGRAKDLGSAAVLIAIIDAVITWAILLWSHFG-
General information:
TITO was launched using:
RESULT:
Template:
3ZE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49391 for 594 contacts (-83.1/contact) +
2D Compatibility (PS) -10512 + (NN) -5364 + (LL) 952
1D Compatibility (HY) -9200 + (ID) 2100
Total energy: -75615.0 ( -127.30 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_3ZE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZE3-query.scw
PDB file :
Tito_Scwrl_3ZE3.pdb
: