Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MKIFLSCKS-----LLIQRSLEFYLSDCLSPVEVCDLVLSDDEKLETNK---------------PLCFIEERLRKPFTKQSVKEDIKNFYRALKISEKPCEEIQFSKEQKIKQLLEEYTHKLCQIISQ
1U6T Chain:A ((1-121))
VIRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFNESQYRGDYDAFFEARENNAVYAFLGLTAPPGS--KEAEVQAKQQALEHHHHHH------
General information:
TITO was launched using:
RESULT:
Template:
1U6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12263 for 632 contacts (-19.4/contact) +
2D Compatibility (PS) -10493 + (NN) -3105 + (LL) 984
1D Compatibility (HY) 1600 + (ID) 850
Total energy: -24127.0 ( -38.18 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_1U6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U6T-query.scw
PDB file :
Tito_Scwrl_1U6T.pdb
: