Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKNDDFVIAKNQLGNIVPNSVGVIRAVNGKS----AMVLFIGLNELKRVD----FSELEAIDIYRTGKGYDKKICNICHILKNTDGFEINQTDAKGRKTTRPSCRECRKNIDGVKLSSTEKKKMDEIAPPKGSVFTCPICEKRSIVGVTANLVHDHNHDTGWGREWICDSCNTGLGRFKDNPKFLEKVIEYLKKYEK |
| 1QP2 Chain:A ((1-69)) | MVQRGSKVRILRP-ESYWFQDVGTVASVDQSGIKYPVIVRFEKVNYSGINTNNFAEDELVEVEAPKAKPKK------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19367 for 289 contacts (-67.0/contact) +
2D Compatibility (PS) -5758 + (NN) 276 + (LL) 5848
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -21901.0 ( -75.78 by residue)
QMean score : 0.362
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