Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIDLAEVTGAKAAQERKKEQPTIANGLDKNAFMKLFLEQLKNQDPTAPMETDKIITQTAQLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANNALREVSALNSVSMIGKIAETDVSGANFDGNNKLSFSLFFDEKIDASKGVPAIQILNENNELVKTIPLKDYNGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVESVIFDKGKPMLRMGEMILPIDSAIEFYKPDQKPLDQKLSDQKPQKLSEQKALEQKISEQKPQEPLDQKLSDQKPQKPLEQKISEQKPLDQKLSDQKPQKPLEQKISEQKPLDQKPQTPPKETA |
3C12 Chain:A ((50-187)) | --------------------------------------------------------------------------------------------------------------------------DQVLKGAALVGHNVLVPSAQVAIDATGSAKGVVAAT-----SAGFVNFEITDANGTFVKQLSVPA--SAAGEVSFAWDGTDANGNRMAAGKYGITATQTDTAGAKSKLATYV-DAPVDSVTIGSDGLYLNLTGLGTSPLANVLRVS----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19610 for 964 contacts (-20.3/contact) +
2D Compatibility (PS) -14096 + (NN) 410 + (LL) 14016
1D Compatibility (HY) -4400 + (ID) 1350
Total energy: -25030.0 ( -25.96 by residue)
QMean score : 0.335
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