Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MVIVLVVDSFKDTSNGTSMTAFRFFEALKKRGHAMRVVAPHVDNLGSEEEGYYNLKERYIPLVTEISHKQHILFAKPDEKILRKAFKGADMIHTYLPFLLEKTAVKIAREMRVPYIGSFHLQPEHISYNMKLGQFSWLNTMLFSWFKSSHYRYIHHIHCPSKFIVEELEKY-NYGGKKYAISNGFDP--------MFKFEHPQKSLFDTTPFKIAMVGRYSNEKNQSVLIKAVA-LSRYKQDIVLLLKGKGPDEKKIKLLAQKLGVKTEF-GFVNSHELLEILKTCTLYAHTA-------NVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALN-YTLENSVIQIEKVYEEAIKDFKNNPNLFKTLS |
| 3OKP Chain:A ((4-381)) | SRKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAYD----KTLDYEVIRWPRSVMLPTPTTAHAMAEIIRE--REIDNVWFGAAAPLALMAGTAKQAGASKVIASTH--GHEVGWSMLPGSRQSLRKIGTE---------VDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACG-VPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPR------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145307 for 3049 contacts (-47.7/contact) +
2D Compatibility (PS) -38775 + (NN) -15419 + (LL) 1828
1D Compatibility (HY) -4000 + (ID) 3250
Total energy: -204923.0 ( -67.21 by residue)
QMean score : 0.388
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