Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTLFKEITSKCYVNGNEMKENSSNVLDQ-YFTKPSVALKCFQKACEVIKKYENPDDFIFLEPSAGDGVFYDLFPKD--RRIGIDIEPKRD-------------GFIQCDFLNYKLP---VHQKVICLGNPPFGHRGVMALEFINHARNCDFVCFILPMFFE----S----QGKGSIKYRVK-GLNLLYSERLEKNAFIDFKNKEVDVHCVFQIWSKKYQNKKSEFSWYKNRHKEPFSEYIKVFTVSLAKNRECGKEWIFNQKASFYISSTFYKSTQIVENFEEVKYQSGIAVVFTSADKVLNAKLKKLFQEIDWTKYASLATNSCYHLGKSHIFQALHDHLDSLKGN |
| 3TQS Chain:A ((12-193)) | ----------------------------QHFLHDSFVLQKIVSAIHPQ-------KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLRVVGNLPYNISTPLLFHLFSQIHCIEDMHFMLQKEVVRRITAEVGSHDYGRLSVMAQYFCDNTYLFTVSPQAFTP----PPRVESAIIRLIPRHNFTPVAKNLDQLSHVVKEAFSYRRKTVGNALKKLINPSQWPLLEINPQLRPQELTVEDFVKISNILN-------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -86089 for 1069 contacts (-80.5/contact) +
2D Compatibility (PS) -15914 + (NN) -1636 + (LL) 6780
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -100459.0 ( -93.97 by residue)
QMean score : 0.367
|
|
|