Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLEQAFLKIIEKKHKELNLGQDYNAIFSKIRDFEANAIGQIGEEFLKSVLNAIDEVINDGIIHDEYDIMTKSGVSFEVKTAQKGRTNNTFQFNGINPRYNYDFLICLGVCEDQLLYRIFKKDEIHYIHKERKYFMKQNEFKKQ------LVPMNPDNQVNDKL--TLNLKELKEITNLIKELERILELD |
1RVV Chain:? ((1-154)) | MNIIQGNLV---------GTGLKIGIVVGRFN-------DFITSKLLSGAEDALLR---HGVDTNDIDVAWVPG-AFEIPFAAKKMAETK----------KYDAIITLGTVIRG------ATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1RVV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -344 for 1128 contacts (-0.3/contact) +
2D Compatibility (PS) -15681 + (NN) -4465 + (LL) 3296
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: -21694.0 ( -19.23 by residue)
QMean score : 0.336
|
|
|