Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQDKIIEILQISPIVPVVVVENIKDAVPLAQSLIEGGIPIIEVTLRSNCALEAIELIAKNVPKMRVGAGTILNLTQLEQAQNRGAEFLISPGLTIKLLEHAKKKDMPLIPGVSSSSEVMQALELGYNALKFFPAEYCGGVKLLNAFNGPFKGVKFCPTGGISADNMRSYLALENVVCVGGSWLTPKDLIQNKEWDKITEICKRALALR
4E38 Chain:B ((23-225))
MMSTINNQLKALKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPGFNPNTVRACQEIGIDIVPGVNNPSTVEAALEMGLTTLKFFPAEASGGISMVKSLVGPYGDIRLMPTGGITPSNIDNYLAIPQVLACGGTWMVDKKLVTNGEWDEIARLTREIVEQV
General information:
TITO was launched using:
RESULT:
Template:
4E38.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181047 for 1745 contacts (-103.8/contact) +
2D Compatibility (PS) -22762 + (NN) -13572 + (LL) 0
1D Compatibility (HY) -16800 + (ID) 3950
Total energy: -238131.0 ( -136.46 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_4E38.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4E38-query.scw
PDB file :
Tito_Scwrl_4E38.pdb
: