Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDHLKHLQQLQNIERIVLSGIVLANHKIEEIHSVLEPSDFYYPPHGLFFEIALKLH-EVNCPIDENFIRQKMPKDKQISEDDLVAIF--AASPIDNIEAYVEEIKNASIKRKLFTLANTIREQALESAQKSSDILNAVEREVYALLNGSTIEGFRGIKEVLESTMNLITENQRKGSLKVTGIPTGFVQLDNYTSGFNQGSLVILGARPSMGKTSLMMNMVLSALNDD-RGVAVFSLEMSAEQLALRALSDLTSINMHDLESARLDDDQWENLAKCFDHLSQKKLFFYDKSYVRMDQIRLQLRKLKSQHKELGIAFIDYLQLMSGNKATKERHEQIAEISRELKTLARELEIPIIALVQLNRSLENRDDKRPILSDIKDSGGIEQDADIVLFLYRGYIYQMRAEDNKIDKLKKEGKVEEAQELHLKVNEERRIHKQNGSIEEAEIIVAKNRNGATGTVYTRFNAPFTRYEDMPVDSHLEEGQETKFEMPTT |
| 4NMN Chain:B ((5-432)) | ----------ESAERAVLGSMLEDPENIPLVLEYLKEEDFCIDEHKLLFRVLTNLWSE-GNKLDFVLIKDHLEKK---PIDWLEELYEEAVSP-DTLEEVCKIVKQRSAQRAIIQLGIELIHKGKENKDFHTLIEEAQSR-IFSIAESATSTQFYHVKDVAEEVIELIYKFKSSDRL-VTGLPSGFTELDLKTTGFHPGDLIILAARPGMGKTAFMLSIIYNLAKDEGKPSAVFSLEMSKEQLVMRLLSMMSEVPLFKIRSGSISNEDLKKLEASAIELAKYDIYLDDTPALTTTDLRIRARKLRKE-KEVEFVAVDYLQLLRPPVRKSPRQEEVAEVSRNLKALAKELRIPVMALAQLS--------KRPQLADLRESGQIEQDADLILFLHRPEYYT---------------------------PEEQGI---------AEVIIAKQRQGPTDIVKLAFIKEYTKFANL------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NMN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200454 for 2994 contacts (-67.0/contact) +
2D Compatibility (PS) -44231 + (NN) -24213 + (LL) 5956
1D Compatibility (HY) -34800 + (ID) 7100
Total energy: -304842.0 ( -101.82 by residue)
QMean score : 0.460
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