Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MHTVLQIGAGGVGSVV-AHKMGMNRDVFKNIILASRSLDKCHAIKESMLKKGLGEIGVEQVDADDTQALIALIQKHKPKVVVNVALPYQDLTIMQACLETKTHYIDTANYEHPDLAKFEYKEQWAFDKAYKEAGILGVLGAGFDPGVTNAYVAHAQRHHFD-------------------------TIHTLDILDCNAGDHKRP--FATNFNPEINLREVSSKGRYYENGK-------------------WIETKPLEI-KQVWAYPQIGEMDSYLLYHEELESLVKNVKGLRRARFFMTFSQNYLTHMKCLENVGMLGIKEIEHQGVKIVPIQFLKTLLPDPESLAKDTTGKTNIGCYM-TGIKNNQDKTLYIYNVCDHKKCYEEVGSQAISYTTGVPAMCAAKM-ICNDTWSVEHFKAGVFNVEELNTDPFMEELIKQGLPYEVIER-------------------------------- |
| 2PH5 Chain:A ((6-474)) | NTKKILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK-----VDVAQQYGVSFKLQQITPQNYLEVIGSTLE-ENDFLIDVSIGISSLALIILCNQKGALYINAAT-EPWKERRTNYSLREEVLRLKDKTQKTALITHGANPGLVSHFIKEALLNIAKDNGLTINRPKNAAEWANLAMTLGIKVIHVAEQDSQVTYPPKSPGEFVNTWSANGLILEGLQPAEIGWGTHEAHWPHDAYSHSNGPQCAIYLSRPSAGVMVRSWT-PTLGAFHGFLITHAETISLTNFLTLKNGSELLYRPTVHYAYN---PCPDARLSIFELKSNEWK--PQNKNRLILNE------IIDGCDELGVLLMG----NQRGAYWYGSTLSIQEARQIAPYNN------ATSLQVVASMISGIIWAIEHPDEGIVEPEEVDHQYIIDIAKPYLGKVGGYYTDWTPLKNRGELYPEEVDLSDPWQFFNIRVNLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112019 for 3219 contacts (-34.8/contact) +
2D Compatibility (PS) -39216 + (NN) -7953 + (LL) 2000
1D Compatibility (HY) -8800 + (ID) 2550
Total energy: -168538.0 ( -52.36 by residue)
QMean score : 0.370
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