Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKWNEFIVTGDPMILGAQISIVLVSIGVVALLTYTKKWKWLMKEWISSVDHKKIGIMYLLAAVLMFFRGGVDALMMRTQLALPDMK---------------------------FLDAQHYNEVFSTHGTIMILFMAMPFIIG-LMNIAVPLQIGARDVAFPFLNNLSFWTFFMGAMLFNLSFVIGG-----SPDAGWTNYAPLATDFSAGYGINFYLLGVQIAGIGTLMTGINFFVTILRMRTKGMTLMKMPMFTWSSLITSLIIIFAFPVLTVALALMSFDRLFGTAFFTLTNGGLPMMWANLFWVWGHPEVYIVILPAFGIFSEIISTFSRKKLFGYPAMVAAMAVISLLSFLVWVHHFFTMGSGALVNSFFSITTMMIAIPTGIKIFNWLFTMYKGRITFTTPMLWSLAFIPNFVVGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAGTVFSCFAGLTYWYPKMVGYRLNEKIGKWFFWIFVVGFNVCFFPQYFLGLDGMPRRIYTYVQGDGWTTLNFISTVGGFLMGVAFLVLCYNIYYSYKNSKREVTG-DPWD--ARTLEWATSSAVPPKYNFAVLPEWNDLDDFWNRKQKGDPYVNDKNYKPIHMPSNTMVGFVMSVFFFIAGFGLVFYWYWMGIIGLVGILGCMIYRSFQNNDGYHVEVEEIKATEEHNARELATGVKEGNPWNL
2GSM Chain:A ((17-551))-----------------------------------------FTRWFMSTNHKDIGVLYLFTGGLVGLISVAFTVYMRMELMAPGVQFMCAEHLESGLVKGFFQSLWPSAVENCTPNGHLWNVMITGHGILMMFFVVIPALFGGFGNYFMPLHIGAPDMAFPRMNNLSYWLYVAGTSLAVASLFAPGGNGQLGSGIGWVLYPPLSTS-ESGYSTDLAIFAVHLSGASSILGAINMITTFLNMRAPGMTMHKVPLFAWSIFVTAWLILLALPVLAGAITMLLTDRNFGTTFFQPSGGGDPVLYQHILWFFGHPEVYIIVLPAFGIVSHVIATFAKKPIFGYLPMVYAMVAIGVLGFVVWAHHMYTAGLSLTQQSYFMMATMVIAVPTGIKIFSWIATMWGGSIELKTPMLWALGFLFLFTVGGVTGIVLSQASVDRYYHDTYYVVAHFHYVMSLGAVFGIFAGIYFWIGKMSGRQYPEWAGKLHFWMMFVGANLTFFPQHFLGRQGMPRRYIDYP--EAFATWNFVSSLGAFLSFASFLFFLGVIFYTLT-RGARVTANNYWNEHADTLEWTLTSP-PPEHTF------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -537549 for 4464 contacts (-120.4/contact) +
2D Compatibility (PS) -49253 + (NN) 1640 + (LL) 11112
1D Compatibility (HY) -62000 + (ID) 10700
Total energy: -646750.0 ( -144.88 by residue)
QMean score : 0.414

(partial model without unconserved sides chains):
PDB file : Tito_2GSM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GSM-query.scw
PDB file : Tito_Scwrl_2GSM.pdb: