Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDYIIAAHGRYAQEVKDSCQMITGQTTNISAITFTEEMGVTDVLDAYMAVYSPVNETAIIVDIVGGTPCNAAQMFSTKHPEVKVVSGLSLGLIIPLSLGESLEEAMLGAKDNIQFVEQKASHTIVSDDGEEED
2HJQ Chain:A ((1-111))
---------------MFTAKLIKGKTYNVMGITFRA--GVSQTVPKKLYEYLNENPYFILTQELNNQKDDP---INYTESELKGMNKAEHESIIS-NLGRNPSD-FKNADERIAYILKQIDNKGELEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2HJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24719 for 663 contacts (-37.3/contact) +
2D Compatibility (PS) -11876 + (NN) -3194 + (LL) 2616
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -40573.0 ( -61.20 by residue)
QMean score : 0.228
(partial model without unconserved sides chains):
PDB file :
Tito_2HJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HJQ-query.scw
PDB file :
Tito_Scwrl_2HJQ.pdb
: