Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVETIDVFSPVELYLLLSPIEAQHLFGVPDKLTFLLKGEDVFAE-GFDRLKSKGILNEAGELTDGGGFLIDSLIEYYQSKKYVRMNQLMFAFLEKTPNELLVMIEITPQKEYRFERMNKIYALEMIKDFFPLIRREPGERETEFLKEELTNEERKRATAFDPEKNFISMEFFHVDEEPKEKNNAKYYKQYLAFEMEDKLMMVDVVNDTYYRGSQYALLKLLFDELEFPYEEAK |
1SGM Chain:A ((5-188)) | ----------------------------GDSREKILHTASRLSQLQGYHATGLNQIVKESG-------APKGSLYHFFPNGKEELAIEAVTYTGKIVEHLIQQSMDESSDPVEAIQLFIKKTASQFDNTESI-----KGIPVGLLASETALISEPLRTVCMKVFKSWEAVFARKLMENGFAEEEANQLGTLINSMIEGGIMLSLTNKDK----------TPLLLIAEQIPVLVR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1SGM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 27263 for 1420 contacts (19.2/contact) +
2D Compatibility (PS) -19670 + (NN) -10723 + (LL) 3784
1D Compatibility (HY) 4000 + (ID) 1100
Total energy: 3554.0 ( 2.50 by residue)
QMean score : 0.172
|
|
|