Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKNILVVIIVSVLAISAIVSAFFLMRDDAYAIETEGFTYSPKGKVVDFSSEAKYNDTWINNEKTITDKKEMKPINLARTLFLKDGRIQFLGKSVAVKSASDLIELPSKTSITESKGSYKAKSDSNKTLAQLPKGTVVKLAEGRYIILDNAYLKNKQGLNKKLPKNVLVSIDENKKVMLMGDKTIEELGGDDAYIEMENNHYHFDLKKEMLVSQTAKETDIDIRSIKVEIDDNAEKRSLKTAKETEKETTKDSTEKESEKQSNDASGQKSAQNNERSESKDDQTQDASGNNTNGSANNNTARSNGTGGSNSDTNGSQPGGTQNKPNEGDVNKANEIIKKLNEAENTNTFQVP-----------IVDVNLTVKGQVAAAKLKLTDSSKRLNSLEAILYDSKNNIVKKEKLNSTKANQN----FTFNNLKYGETYQVVVQGSYKSASNKNQDTIFFRQTVEAKPVVLT---PKVTERGEDYMKAELTATELYGHIDKLVLKIKENNSNVITSQKVTVDASQLTKDGQVEVKFNSLSSDKEYIIEMEELIVDGKNVTDDGWYFISSTLKAKPTIEGLNLSYSTDKGEFVASPVNLVDRDESITSIRYVAYLEDDYKVNGSNAKEYAYSVVDANQKKTAVKVGRTVDMNDGNYIFVGYISGNNGQSDYTFATPASNSVVVGKKTKPTVEFSLKEAEQDKLTINYEVFDADNTLLFDNLTHPTLKLYKSDAQGMYSGNPVATVDLTKKSDITNLLEFDGLESEAYYVVVMTGSYNLDDGAGIMVDELIGQSSVFRTTEITKVNASFSLDSVDTTKVAINVKLSDAAVNLNDANLKIYEKKTNTLVKTVPLHGDFEKLMSDSGNSYLFENLSINKEYLVKVEDGYDSGMNHVPVEGQFIFKTKKESPETDKVLLDYKASEMKLGGLAGIAATEKPLIDDYNAVSSITYSIYKADDLNTPLVEQEVSTAADFEKNVYFDLTNKLLGRGYSYVIKADVVWNDNYEDHHIEISSDTIQIKKEKPTVEYEILSRTASEIKLNVYVEDEEESIVPGTLEITSTTGGNEQLQSGKNNVTLPLSSEGTTTIKTTGDYIITSGSSAISDIFMTKQLAALNTTTPQVGAKIAMDASGKSMTIAPEPNAVAKTSVMRTKYDLKDAASSKPDYSITKSGPNQFNTQNLNLPLGNIWFDNSYQLTLDMKMNYTENKIDNQNLANNYYLSIGNGASFVSSLSGAVSTTNNVNSADVFKVTKASTDLEGNISGVTFKNIWTDKYIAYRNGILISNSETPDSFKLIRQADGSYVPELSGRYVNFSVGLVTDEAAGSKIDLYSTQEKLEQVSEAISVKALEEPAISAENIGVYDKRVKLDVIGEDKDNTTVKKANKNELFVNVYKADGTTLVNSIRVDGLPTRDVSVTELSPDTDYVVKVEGKYDLLDGNGEKDKVYYSETIKTEKSLPSMTSTDYSWSPAYGQRAIKGKIDFADESSVLTNIEYRLYDAATISSSLSNLVALEQELGNKTPVSTFDNMTNNPEFSIYNGSGTQNFVSGKTYVIAAYMKTSLTRAPIFLSDAKAVYISPPSNVSAPITLENVSTREATLKFSYNDPQSYFVGGTNKDFQYVLKNTTTGTEVKKGSFQGGNTASWINTFEDLEPATGYTLTISTQYDNLNGGLVRAWNTSFNFTTDDEYVTSNSLTIQLDAGAKAVKLQAKEVRPGSTTIENIKMEFYELIDYGGNNERTQLVETKNITLPSSYPATIAADFNVAGKKKNQSFLGKMIVTYRTPTNEVKTYEKTSNFITLQEDIAAGLKSFKSVRATNDALEVKLDIPQDNSTDKGSYTYELKNENGDVIDTEKVAAEDISKTVSLSMEPTSNYTLTVINPDNQPVALYQGNNEENNLKAEIKKDSFTLMSNNTADAKTTMTVTVEPKELTAWQTVQSWFGKDFTETYNIQKDELDTGVKIDTNYQDTKVTVEETKSGKNFGIIELEESK |
| 4E9L Chain:A ((678-991)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FVAGPLDAAHSSITLNPDKPVVGGTVTAIWTAKDANDNPVTGLNPDAPSLSGAAAAGSTASGWTDNGDGTWTAQISLGTTAGELDVMPKLNGQDAAANAAKVTVVADALSSNQSKVSVAEDHVKAGESTTVTLVAKDAHGNAISGLSLSASLTGTASEGATVSSWTEKGDGSYVATLTTGGKTGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVADNKTPTVKTTTELTFTMKDAYGNPVTGLKPDAPVFSGAASTGSERPSAGNWTEKGNGVYVSTLTLGSAAGQLSVM---PRVNGQNAVAQPLVLNVAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4E9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 115993 for 2215 contacts (52.4/contact) +
2D Compatibility (PS) -30949 + (NN) -908 + (LL) 96260
1D Compatibility (HY) 7600 + (ID) 1450
Total energy: 186546.0 ( 84.22 by residue)
QMean score : 0.149
|
|
|