Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LSSIDQARKTIKALNSTYKIVHVTELATLGKLSALREKAEAAVSYYETILKSLRWVRKTMYTSNNQIKEEKNVTAIAITSERGLCGAYNSEVFAEIDQLIESLGDQVTINWVVVGEQGHRYLTKLGQNITSYLQFSLENIDLETTTAVTADFIDLIHSEQMDALYVIFTKYLNAVQSEAMCEKIYPEIPEDSDTELIEVDYVLDFETDDEQVEQLLLENYLCGLLYSMFRYSVASEYCMRRIAMKQAKDNIQKQLEEAIFDARKQALQQKTGELLDIISGAQTIRKDEE |
1E79 Chain:G ((1-272)) | -ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALY-----------EKADIKTPELIIGVSSDRGLCGAIHSSVAKQMKSEAANLKE---VKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELLNSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTISSAESMSI------YDDIDADVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87206 for 1972 contacts (-44.2/contact) +
2D Compatibility (PS) -28217 + (NN) -13659 + (LL) 2244
1D Compatibility (HY) -3200 + (ID) 2450
Total energy: -132488.0 ( -67.18 by residue)
QMean score : 0.456
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