Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGIILATHGEFAEGILQSGTMIFGEQENVKAITLMPSEGPEDIKAKMEAAIASFDSQDEVLFLVDLWGGTPFNQANGLYELHKDKWAIVAGLNLPMLIEAFSSRFTMESAHEIAANILAPAQEGVRVKPEELQPQVTATEQPQAEIAAVGDGKIEFVLTRVDSRLLHGQVATAWTKATHPTRIIVVSDAVAKDDLRKKLIEQAAPPGVKANVIPVQKMIEISKDPRFGNTKALLLFENPQDVLRAIEGGVEIEQVNVGSMAHSVGKVVVSKVLSMGKDDVETFEKLK-EKGVKFDVRKVPNDSSANMEDIIKKAKHELKTQ |
| 3LFJ Chain:A ((-1-165)) | --------------------------------------------------------------------------------------------------------------------------------------------------------HMWKIVFARIDDRLIHGQVMTRWMKGFPEASIVIIDDELAVDEFMKNIYTMAAPPGVKVKVFGVDAALKEWSQKTSVEEKVFLLFKNIDTCKRVMDGGLPITTLNIGGVAKTPQRKGISQSVSLSEDEVKTLLELKTKYNVDVYLQMIPDSEKIHLTTVVEKYFPE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87374 for 1288 contacts (-67.8/contact) +
2D Compatibility (PS) -17714 + (NN) -5285 + (LL) 12024
1D Compatibility (HY) -15200 + (ID) 2450
Total energy: -115999.0 ( -90.06 by residue)
QMean score : 0.582
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