Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MTKIWIDAGHGGKDSGASGNGLVEKNWVLTVAKQLQTELVKAGFEVGMTRTNDTFYELSDRAKKANSFKADLFISLHFNAGGGKGYEDYIYTSVPAATVEIQKIIHKNIITKVTKHGMNDRGMKKANFAVLRETAMDAILLEAGFCDSTDALILEKKAYQTDYCLGIVSAVQEIFGAMVTKYRAGKYLTSDDAISGTNIKGYLEAGTKVFVYKETEKTLNLTTTKGVPGSWVLKTEVNTGKR |
| 4M02 Chain:A ((36-204)) | AVTQVRYVDVTTGKDIIPPKTYSGNVDQVVTIDNQ-QSALTAKGYNY--TSVDSSYASTYNDTNK------------TVKMTNAGQSVTYYFTDVKAPTVTV------------------------GNQTIEVGKTMNPIVL-----------------TTTDN--GTGTVTNTVTG----LPSGLSYDSATNSIIGTPTK-----------IGQSTVTVVSTDQANNKSTTTFTINVVDTT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3456 for 1209 contacts (-2.9/contact) +
2D Compatibility (PS) -17912 + (NN) -311 + (LL) 5756
1D Compatibility (HY) -2400 + (ID) 1700
Total energy: -20023.0 ( -16.56 by residue)
QMean score : 0.138
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