Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGLLLLMVVVLSVFGLSACGGGSSSGDKTEITYYQFSAP-ADGKALDEMVKEFEKQNPDIKVNVQTIAFNDYFTKLQTQIAGGDAPDAFELNYETFMQYAEKGVLADLTSYIEKDKDFDPSTLNKQAYDAFKYDGKQYGMVESFSNVVTIYNKDLFDKAGVEYPTADWTWKDEEAAAKKLTDAKNKVWGTSQPVTMN-EFYKVAAQNGGSIFNEDL-----TETTINSPENVEALTHLTNEVTDSKVAPSPADLSGQLPEDLFMNGQIAMLHTGIWLFDMFQDAPFKWDV-QVEAGNT-QKATHFFANGIGVSKDSDKKEAAFKFASFMSANEEAAKIRIDNNWELPATENKEILQPYLDATPPDNREAVFESLQYMVLPPVVKDWNKISDYTNSEFEKVLNGDSTPEKALKNSEDNINKTMGFK |
| 2ZYO Chain:A ((16-394)) | ---------------------------GKPDKLVVWENADDGVQLNNTKKWAGEFTKK-TGIQVEVVPVALLKQQEKLTLDGPAGKGADLVTWPHDRLGEAVTKGLLQPIQVDNS----V-KNQFDDVAMKALTYGGKLYGLPKAIESVALIYNKKLMGQ----VP---ATYDELFQYAKANNKPDEQKYGVLFEANNFYYTYFLFAAKGAAVFKEQDGTLDPNEIGLNSPEAVQGMNEVQKWFTEARL-PQSLK--ADTVNGLFKSGKVAAVINGPWAIKDYQAAGINVGVAPLPKIDGKDAQTFIGVKGWYLSAYSKYPKYATELMQFLTSKEA-LASRFKETGEIPPQKELLNDPMIKNN---PVVNGFAKQASKGVPMPSIPEMGVVWEPINNAHTFVAQGKQTPEQALNDAVKIMKEKIQT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67558 for 3196 contacts (-21.1/contact) +
2D Compatibility (PS) -40322 + (NN) -24509 + (LL) 2180
1D Compatibility (HY) -11600 + (ID) 3750
Total energy: -145559.0 ( -45.54 by residue)
QMean score : 0.458
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