Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDASTSFAILPSNVKQKTAFERKVNQVKAASWTNNCLTGTLDIGQFSCYFVNEKIARVTVNPFGEV-DLTPSIAAIHDNEKQAAKFTETNDCYELHFADKEVIVCKNPFQIIM-K-QAGKRIFQTEGLAINRDKE-HQISIQSEPGTAIFGLGEKTGAL---NKAGSIISMWNTDVYSPHNKDTVELYQSIPFMIADT--AKTTYGLFYDNSHRTEFDFQSFEEMYTVLAEGGQANLYIIFGEDVKEVVANYTDLTGKTPLPPKWSLGYHQSRYSYTSEEEVERIANTFKEKEIPLDCVFMDIHYMDDFRVFTFNPDTFPNGPELIARLREQNIDVVPIVDPGIKKDV-----DYSVYQEGIKNNYFCTKLEG-SIYYGDVWPGVSAFPDFLSTTVQHWWGSLHKFY-TDLGIRGIWNDMNEPSVFNESKT---------MD------------LDVVHNL-DGKNVTHKEAHNLYGLYMSKATFEGLKRLVPNERPFSLTRAGYAGVQRYSAVWTGDNRSHWEHLEMSLPMIMNLGLSGVAFTGADVGGFSSDCTKEMLIRWTQAGAFLPYFRNHCVQDSIYQEPWAFGAD--AEKIVKQYIELRYAFLPYIYTEFQKTAESGLPLVRPLYMEFKDERDLIQVNDQFMLGENILVAPIVREGQAKRLVRLPKGLWFNYWTKEQFV-GGDYIIADAPIDTMPIYIKAGTILPVGSSVQNTKETQ--ELTLEVYLDS-ETATGYVYNDDGKSYQY-ESGAVSKTTLTATFKNGEVLINATHQGEAN--LQQKVTTIQVFGEKIDKITRAGI
3LPP Chain:A ((113-851))-------------------------------------------VLFTTQNQTPNRFRFKITDPNNRRYEVPH-QYVKEF-----------TGPTVSDTLYDVKVAQNPFSIQVIRKSNGKTLFDTSIGPLVYSDQYLQISARLP-SDYIYGIGEQVHKRFRHDLSWKTWPIFTRDQLPG--DNNNNLYGHQTFFMCIEDTSGKSFGVFLMNSNAMEIFIQPT-PIVTYRVTGGILDFYILLGDTPEQVVQQYQQLVGLPAMPAYWNLGFQLSRWNYKSLDVVKEVVRRNREAGIPFDTQVTDIDYMEDKKDFTYDQVAFNGLPQFVQDLHDHGQKYVIILDPAISIGRRANGTTYATYERGNTQHVWINESDGSTPIIGEVWPGLTVYPDFTNPNCIDWWANECSIFHQEVQYDGLWIDMNEVSSFIQGSTKGCNVNKLNYPPFTPDILDKLMYSKTICMDAVQNWGKQYDVHSLYGYSMAIATEQAVQKVFPNKRSFILTRSTFAGSGRHAAHWLGDNTASWEQMEWSITGMLEFSLFGIPLVGADICGFVAETTEELCRRWMQLGAFYPFSRNHNSDGYEHQDPAFFGQNSLLVKSSRQYLTIRYTLLPFLYTLFYKAHVFGETVARPVLHEFYEDTNSWIEDTEFLWGPALLITPVLKQGADTVSAYIPDAIWYDYESGAKRPWRKQRVDMYLPADKIGLHLRGGYIIPIQEPDVTTTASRKNPLGLIVALGENNTAKGDFFWDDGETKDTIQNGNYILYTFSVSN-N-TLDIVCT-HSSYQEGTTLAFQTVKILGLT---------


General information:
TITO was launched using:
RESULT:

Template: 3LPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -256286 for 6261 contacts (-40.9/contact) +
2D Compatibility (PS) -74224 + (NN) -30188 + (LL) 4672
1D Compatibility (HY) -36800 + (ID) 9400
Total energy: -402226.0 ( -64.24 by residue)
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_3LPP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LPP-query.scw
PDB file : Tito_Scwrl_3LPP.pdb: