Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIIFNADDFGISPGAVYGILESYKRGVVKSTTLLANSPAFD----LAVEVAKENPGLDIGAHLTLTFGSPVLQGLETLTDDDGRFRRNYTSLENGLADVDMNEVERELTAQIEKILD-AGITISHFDTH--HSIEPLIYPVQHKLAEKYGVSIRRHSDVSDFGAIKTPDLFATEFYADGVSFETIKKLVQKHIGTNDVVEVMTHPAFIDETLREISSYVEPRIKEVSILTSRELQAYLGQQEVEIISFRDL |
2VYO Chain:A ((27-152)) | -MIAINFVD-GPVRGVTDRILNTLDELGVKATFSFTVNQKAVGNVGQLYRRAVE-EGHNVALRV-----DP--S-----------MDEG-------YQCLSQDALENNVDREIDTIDGLSGTEIRYAAVPICNG---QVNSEMYNILTERGVLPVGY----------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77598 for 850 contacts (-91.3/contact) +
2D Compatibility (PS) -12954 + (NN) -6853 + (LL) 8808
1D Compatibility (HY) -800 + (ID) 1050
Total energy: -90447.0 ( -106.41 by residue)
QMean score : 0.540
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