Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNISDIIEAYLKQVLESSEAVEIKRSEIADKFECVPSQINYVINTRFTMERGYIVES--KRGGGGYIRIIKVKMNDKLQLLEAIISMVHDKKVSQSFSEDVILRLLEEEVITKKEARLMVAALDREVLILPLPDRDILRSRILEAMLVALKYD
2HTJ Chain:A ((15-61))
-----------------------GKTAEIAEALAVTDYQARYYLLL-L-EKAGMVQRSPLRRGMATYWFLKG----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HTJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22851 for 264 contacts (-86.6/contact) +
2D Compatibility (PS) -4522 + (NN) 1932 + (LL) 11220
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -17171.0 ( -65.04 by residue)
QMean score : 0.225
(partial model without unconserved sides chains):
PDB file :
Tito_2HTJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HTJ-query.scw
PDB file :
Tito_Scwrl_2HTJ.pdb
: