Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEVKEYKQLNGLALAYMGDAVYEKFIREYLLAAGKTKPNQLHKTATKFVSAKGQAVALKAMIAEGFLTEEEDRIAKRGRNAKSYTVPKNTDPGTYSMSTSFEAVLGYLYLAGEMERLQEWMEKALEIVEKGVETN
1ZTD Chain:A ((5-91))
------------KGLAKFGDSLINFLYSLALTEF-------LGKPTGDRVPNASLAIALELTGLSK--------NL---RRVD-----------KHAKGDYAEALIAKAWLMGL-ISEREAVEIIKKNL-------
General information:
TITO was launched using:
RESULT:
Template:
1ZTD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32143 for 565 contacts (-56.9/contact) +
2D Compatibility (PS) -9397 + (NN) -3360 + (LL) 1900
1D Compatibility (HY) 0 + (ID) 900
Total energy: -43900.0 ( -77.70 by residue)
QMean score : 0.307
(partial model without unconserved sides chains):
PDB file :
Tito_1ZTD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZTD-query.scw
PDB file :
Tito_Scwrl_1ZTD.pdb
: