Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQENEQEWIGGRNPVLEVLRSDRDIHKIYVQEGSQKGVLKQVLTLAKERKIQVQFVPKQKIEKVVSGAHQGVAAQVAAYQYAELDDLFAAAEAKDEMPFFIILDELEDPHNLGSIMRTADSVGAHGIIIPKRR--SVGLTQTVAKASTGAMEYVPVVRVTNMVRTMEELQKRGLWIFGTDAKGS-SDYRTMDVDMPLAIVIGSEGFGMSRLVREKCDFLVHLPMRGKVTSLNASVAASLLLYEVYRKRFPLEK
1ZJR Chain:A ((22-175))
-----------------------------------------------------------------------------------------------RQKDLIVFADNVKNEHNFSAIVRTCDAVGVLYLYYYHAEGKKAKINE---GITQGSHKWVFIEKVDNPVQKLLEFKNRGFQIVATWLSKESVNFREVDYTKPTVLVVGNELQGVSPEIVEIADKKIVIPMYGMAQSLNVSVATGIILYEAQRQREEK--
General information:
TITO was launched using:
RESULT:
Template:
1ZJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114607 for 1188 contacts (-96.5/contact) +
2D Compatibility (PS) -17016 + (NN) -10290 + (LL) 9024
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -143439.0 ( -120.74 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1ZJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZJR-query.scw
PDB file :
Tito_Scwrl_1ZJR.pdb
: