Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTTIQQLVKHVSVREFKNERLSDETKQHLLTAARSASSSHFVQSFSILEITDEKLRKELAEITNSASYVNQTGTFYVFVGDLYRQSKLLLENNRTLDGLRNMESLLVSVIDATIAAQNMVIAAESLDLGICYIGGIRNDIGKVAELLNLPPFTIPVFGLTVGVPEYKN---QVKPRLLLENQVGENQYPHEQFTDLKAYEELTKDYYALREKNQHQTSWGDKNVEFFEEIRRPEIASFLKKQGFTLD
3GE5 Chain:A ((28-198))
-RLIEDFFRTRRSVRKFIDRPVEEEKLMAILEAGRIAPSAHNYQPWHFLVVREEEGRKRLAPC-SQQPWFPGAPIYIITLGDHQRAW-KR-------------GAGDSVDIDTSIAMTYMMLEAHSLGLGCTWVCAF--DQALCSEIFDIPSHMTPVSILALGYGDPTVPPREAFNRKTIEEVVSFEKL-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GE5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98691 for 1196 contacts (-82.5/contact) +
2D Compatibility (PS) -17911 + (NN) -7563 + (LL) 5100
1D Compatibility (HY) -7200 + (ID) 2050
Total energy: -128315.0 ( -107.29 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_3GE5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GE5-query.scw
PDB file :
Tito_Scwrl_3GE5.pdb
: