Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFPQVLTIAGSDSGGGAGIQADIKTFQERRTFGMSVITAI-TAQNTLGVKAVHKIPVEMIREQCDAIAEDFQVSAVKTGMLADAEIIREVVRNIRLHNFPNLVIDPVMIAKGGTALLENEATQVLKDELLPLGTIITPNIPEAEEILG-EKITTKAEIERAAKKIYDMGVKAVVIKGGHS-EMTEAADFYFDGVTAKWLTSERFDTPHTHGTGCTFSACIAAELAKGNSLLDSVMVAKEFISSAIKYPLGIGHGHGPTNHFAY-RMEDGK
4C5K Chain:D ((5-267))----KVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTMDKDTWSHDVTPLPMDVFEKQLET-ALSIGPDAIKTGMLGTEEIIKRAGEVYEASNAQYFVVDPVMVCKGEDEVLNPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKKAATIIFDKGAQHVIIKGGKALDQDKSYDLYYDGQTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRIE---


General information:
TITO was launched using:
RESULT:

Template: 4C5K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124699 for 2325 contacts (-53.6/contact) +
2D Compatibility (PS) -28900 + (NN) -10244 + (LL) 272
1D Compatibility (HY) -15600 + (ID) 5250
Total energy: -184421.0 ( -79.32 by residue)
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_4C5K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C5K-query.scw
PDB file : Tito_Scwrl_4C5K.pdb: