Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTK-GFTSYFLTFEDGARLEIMSRTDVTGKT-----TGENL-GWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTG-DGYY--ESVVLDPEGNRIEITW
3RMU Chain:A ((4-132))
GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVP-LPEHGVSVVFVNL-GNTKMELLHPLG-LDSPIAGFLQKNKAGGMHHICIEVDN---INAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELE-
General information:
TITO was launched using:
RESULT:
Template:
3RMU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36077 for 755 contacts (-47.8/contact) +
2D Compatibility (PS) -13013 + (NN) -5922 + (LL) 684
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -59878.0 ( -79.31 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_3RMU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RMU-query.scw
PDB file :
Tito_Scwrl_3RMU.pdb
: