Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYLDEQAIENIAIGAAFLGTGGGGDPYIGKMMALTAIKKHGPIKLLSPEEIADDDYFIPAAMMGAPSVLIEKFPKGD--EFVRVFEKLGRYV----GKEVKGTFPMEAGGVNSMIPIV-VAAQLGLPMVDCDGMGRAFPELQMVTF------HLDGISATPMAITDEKGNIGIMETIDNKWTERLARVTTVEMGASSLVSLY--PCNGAQIKQSSIKNIVTLSE----------EIGKVIRETSMDEAEKLQKLLDVTHGYHLFEGK-------------ITDVVRETRAGFNFGRVKIDGLNKDTNSEVIVHFQNE-----------NLVAEKNGEPIAITPDLICMVDLETLMPVTTEALKYGKRVRVMALPADDAWRTDKGIETVGPRYFGYDVDFEPLEELVKKEERRHV- |
| 3C7A Chain:A ((2-404)) | -------TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGLPSQAGFEFQCRDILGDKAAAVSMMSFETLPWACRIKEFGRKVEVLGTKSVLAASLIKGTAKTVDPLSTLQMLHGAEPVFRLAKHFLEMLIMSYSFVHPAILFGRWGSWDGKPVPEAPLFYQGIDQATADMLTACSNECKDVANAIMAACPGNDLSDVKDIYQWYLEYYHEDIQDDHDLYHAITTNKSYKGLVHPVKAVDGGVAPDFGNRYLTEDIPMGMIVFKGVAIAAGVA--IPSNDKLIMWAQEKIGKEYLVDGALTGKDVATTRCPQRYG----FNTLDAILTGKKHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53572 for 2596 contacts (-20.6/contact) +
2D Compatibility (PS) -35928 + (NN) 10346 + (LL) 1084
1D Compatibility (HY) -3600 + (ID) 1900
Total energy: -83570.0 ( -32.19 by residue)
QMean score : 0.209
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