Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MNKLVLSTLSVAAMG-------------MVIF-SGGTAYAADKEGNTVVEYSVEGDYTLVV-----------PEKVNLSNDNATEMSVKTINRNLEPGKEVEVTLSSGLSADGEIELERVGATSDVIT--------------SSFKSNNST------VTMANPVIG-SFSGYAIEETEVSKIQIGSPQ-----------------GDKKAGAYQTTLTFTAAFK-------- |
| 4Q3K Chain:A ((20-260)) | QGMNISKITINQHVGVTLTCYVQDVSQEMSNMSKRPAMLIFPGGGYQFCSDREAEPIALSYLAKGYNAFVLRYSVKEHAVFPRPLIDAEDALSYLKDNAHALHINPDKIAVIGFSAGGHLATTLATEGKVRPNAVVLGYPALIRHEKYWNFPTPKVDQQTPEMFVFHTFEDDLVPLSHPLYIVEELSKANIPVEFHLFKSGVHGLSLGNKIVSNGLDKMIEDDVQVWFDLSCRWLDKVLDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8865 for 1108 contacts (-8.0/contact) +
2D Compatibility (PS) -17349 + (NN) -1814 + (LL) 0
1D Compatibility (HY) -5600 + (ID) 1600
Total energy: -35228.0 ( -31.79 by residue)
QMean score : 0.122
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