Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQSITANDLEQDLK-KVPHNILDVRDADAFVEGHIPDAINIPINELPEKLATLDKEKAYTIICYAGGRSERASQFLAAEGFDVTNVMGGMGAFHGTVTN
3FOJ Chain:A ((1-98))
-MESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMNSIPDNLNYFNDNETYYIICKAGGRSAQVVQYLEQNGVNAVNVEGGMDEFGDEGL-
General information:
TITO was launched using:
RESULT:
Template:
3FOJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55376 for 703 contacts (-78.8/contact) +
2D Compatibility (PS) -10706 + (NN) -2935 + (LL) 128
1D Compatibility (HY) -6000 + (ID) 1850
Total energy: -76739.0 ( -109.16 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_3FOJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FOJ-query.scw
PDB file :
Tito_Scwrl_3FOJ.pdb
: