Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYALEIKGLRKIYSTGVE---ALRGVDLTVEEGDFYALLGPNGAGKSTTIGIITSLVNKTSGQV---SVFGYDLDTDIVRA--KQQIGLVPQEFNFNP----FETVQQIVVNQAGYYG-VSRKEAIKRSEKYLKQSNLWEK-RSERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRREMWTFLRELN-ESGTTIILTTHYLEEAEMLCRNIGIIQSGELIENTSMKSLLSKLQFETFIFDLEPYEEAFEITGYNHVFEDKQTLSVEVERNQGVNHIFEQLSEHGIKVLSMRNKSNRLEELFLKITEEKHQVGEKHV |
| 3TIF Chain:A ((2-209)) | ----VKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFK--YRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVA---------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80853 for 1432 contacts (-56.5/contact) +
2D Compatibility (PS) -20700 + (NN) -5674 + (LL) 9568
1D Compatibility (HY) -13200 + (ID) 3600
Total energy: -114459.0 ( -79.93 by residue)
QMean score : 0.519
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