Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDKLSQEQIDALLSQMSEGKVVDESTEIGDFGRFHPYDFHKPEKFGAEHLESLKTIASAFTKKSMEFVSQRIRIPIHTEATLADQVSFASGYIETMPND-SYIFCIIDLGNPELGQIIIELDLAYIIYIHECLSGGNPKRKLSERRLLSVFEELTLKSILEKFCEALKDSFKSVHPISPEIVNIETNPAL----LRV----TSPNDMMALVSVDIKSEF----WISTMRIGVPFFSVEEIMNKLENVVEYTFDKRRNFDAEVEQELHQVEKEARIRVGEIKTTWKELNKLEVGDVLLTETHIRDTLKGYVTEKWKFECYMGKSGNQKAVKFMRHTGRTEQER |
| 3QTA Chain:A ((2-202)) | -----------------------------------------MPLLIDIRKLTLITRLIQDGAEQVADSLATLAGVDAAVEIKSLSFVQP-EDIATEMGGGTIYSA-RVRLTEPPYGVFLMTFETETAAEIAELMTGSSV--E----DGFTQLHESALQEMCNILTSGFIDGIANTLNATINMGTPTVVQDDATEIADKALSHVRRDSLTIVLDSLVDIKESDVAFSLRIFLIPDPGSFVHLIDQLDYDTD--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QTA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110361 for 1453 contacts (-76.0/contact) +
2D Compatibility (PS) -20569 + (NN) -9903 + (LL) 10416
1D Compatibility (HY) -1600 + (ID) 850
Total energy: -132867.0 ( -91.44 by residue)
QMean score : 0.422
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